
A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA
On Dec. 7, 2022, scientists reported in Nature an ancient environmental DNA (eDNA) record describing the rich plant and animal assemblages of the Kap København Formation in North Greenland, dated to around two million years ago.
The record shows an open boreal forest ecosystem with mixed vegetation of poplar, birch and thuja trees, as well as a variety of Arctic and boreal shrubs and herbs, many of which had not previously been detected at the site from macrofossil and pollen records.
The DNA record confirms the presence of hare and mitochondrial DNA from animals including mastodons, reindeer, rodents and geese, all ancestral to their present-day and late Pleistocene relatives. The presence of marine species including horseshoe crab and green algae support a warmer climate than today.
DNA degrades with time owing to microbial enzymatic activity, mechanical shearing and spontaneous chemical reactions such as hydrolysis and oxidation. The oldest known DNA obtained to date has been recovered from a permafrost-preserved mammoth molar dated to 1.2–1.1 Myr using geological methods and 1.7 Myr (95% highest posterior density, 2.1–1.3 Myr) using molecular clock dating.
To investigate whether the minerals found in Kap København Formation could have retained DNA during the deposition and preserved it, they determined the mineralogic composition of the sediments using X-ray diffraction and measured their adsorption capacities. Their findings highlight that the marine depositional environment favours adsorption of extracellular DNA on the mineral surface.
The Kap København ancient eDNA record is extraordinary for several reasons; the upper limit of the 95% highest posterior density of the estimated molecular age is 2.0 Myr and independently supports a geological age of approximately 2 Myr. This implies that the DNA is considerably older than any previously sequenced DNA.
The reconstructed ecosystem has no modern analogue. The survival of such ancient eDNA probably relates to its binding to mineral surfaces. Their findings open new areas of genetic research, demonstrating that it is possible to track the ecology and evolution of biological communities from two million years ago using ancient eDNA.
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Source: Nature
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